PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021291496.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family C2H2
Protein Properties Length: 196aa    MW: 22841.4 Da    PI: 10.8668
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021291496.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.64.7e-05133156123
                     EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                     y C  Cg++F +++ L +H +  H
  XP_021291496.1 133 YFCRVCGRRFYTNEKLINHFKQiH 156
                     78*****************98767 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MLHKFPNIFN SIQSTRIKAL NPWNSLYRYC HFKKKVGFDS LNSTSTLASK TAQNSVAIFW  60
DLDNKPPNSF PPFEAAIKLK TAASSFGVVR SMVAYANHHA FGYVPKVVRE QRKERKLLNQ  120
LENKGVIKSV EPYFCRVCGR RFYTNEKLIN HFKQIHEREH QKRLNQIESA RGSRRVKLVA  180
KYSMKMEKYK NAARDV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12240.12e-77C2H2 family protein