PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021291555.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 191aa    MW: 21380.9 Da    PI: 7.5075
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021291555.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.71.3e-10249454
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +h  +Er+RR+++N+ +  Lr+l P     + k+ + a+i   ++e+Ik+L
  XP_021291555.1  2 SHITVERNRRRQMNEHLKVLRSLTPCF---YIKRGDQASIIGGVIEFIKEL 49
                    7999**********************9...9******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MSHITVERNR RRQMNEHLKV LRSLTPCFYI KRGDQASIIG GVIEFIKELH QVLQALESKK  60
RRKSLSPSPG PSPKPLQQAT QPDHIPLGFE SVGELGACCN SSLADVEARI SGSNVILKII  120
SKRIPGQILN IIAVLEKFSF EILHLNISSM EDTVLYSFVI KIGLECQLSL EELAVEVQQS  180
FFSEPVFLNE I
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15963KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.11e-77bHLH family protein