PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021291754.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

FAR1

Protein Properties

Length: 245aa MW: 28196.8 Da PI: 6.0587

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021291754.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.5	1.6e-26	77	167	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY eYAk++GF++r+++ ++s +n i+ r+fvCs+eg+r+ ++++ ++ r +r+ tr gCka++++ ++ gkw vtk++ eHnH+l+ XP_021291754.1 77 DFYFEYAKRTGFTIRTNRIRHSLKNMAIIGRDFVCSREGFRAAKHTH-RRDRVlpPRPITREGCKAMIRLAARDGGKWIVTKFVREHNHKLM 167 6***************************************99988.22222459********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MAGTADPHDF SDSDRSSEDE AAVNISEYEG MGPELLQGHN VVNNEFISLE QSGEALDIGN 60 LEPYNGMTFQ SLDDARDFYF EYAKRTGFTI RTNRIRHSLK NMAIIGRDFV CSREGFRAAK 120 HTHRRDRVLP PRPITREGCK AMIRLAARDG GKWIVTKFVR EHNHKLMTHC KFPGELPTIN 180 MLSEEEKDKK IQDLTSELQR EKERSAAFRQ QLQKILKDLE EHAEFMSIRV EDIVDSLKKV 240 ELDDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	1e-41	FAR1 family protein