PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021291885.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

FAR1

Protein Properties

Length: 230aa MW: 26527 Da PI: 5.9337

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021291885.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	89.2	5.8e-28	66	153	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY+eYA++vGF +r+ +s+ks+ +g+i++r++ C+keg++ +++k+ + + r+r+++r gC a++ vk+ek g+w+++k+++eH+H+l XP_021291885.1 66 FYDEYARRVGFLTRIISSRKSELDGSIIHRRLACNKEGFNLNRQKNGRVQIRKRESKREGCMARMIVKREKPGRWVISKFVKEHTHPL 153 9*******************************************99999*********************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MDHKIVIRES CIESESDVCE ADTNKEETFL ITESCTGDES GLCELNLNQE PYEGMLFESV 60 QAAKAFYDEY ARRVGFLTRI ISSRKSELDG SIIHRRLACN KEGFNLNRQK NGRVQIRKRE 120 SKREGCMARM IVKREKPGRW VISKFVKEHT HPLLITSVNG QPNPQDDKDK KIQELSSELD 180 NANQELMACR EQLCAFMNYI EEHTEHLSKT VEGAVQNIRE LECRDNSCHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	6e-53	FAR1 family protein