PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021291963.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family C2H2
Protein Properties Length: 228aa    MW: 25798.1 Da    PI: 7.7317
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021291963.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.000276183123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C k F+++  L  H++ H
  XP_021291963.1 61 YECQFCLKKFTNSQALGGHQNAH 83
                    99******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MGKEQLRLFG FEMSFHDGDE NQPGRSEEVK DSGKSLENIL SKVGKTVKEK SVTKKLEKRK  60
YECQFCLKKF TNSQALGGHQ NAHKSERLKK RRMQLQAKST NLSFADEPPH DYCGVTQHCS  120
LPSSDSWSPS VPECTLFKEF LINFKTTFDQ DQSLYCNLAD FCHSIPLPSH HNHLEEDTCG  180
RHIVIKPSPS YISEDCESLY TRLGLAPPAI HSSSRNGTML ELGKCREG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.14e-11C2H2 family protein