PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021292393.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 182aa    MW: 20384.8 Da    PI: 10.1948
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021292393.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.83.3e-121464655
                    HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    + +Er+RR +++   ++L +l+P+ ++k++ + +s  + L +Av YIk+L+
  XP_021292393.1 14 KTIERNRRIHMKALCFKLASLIPHqRFKPSEEIVSQTDQLDLAVAYIKHLR 64
                    689*********************999999999****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MKSSGGEASK PDRKTIERNR RIHMKALCFK LASLIPHQRF KPSEEIVSQT DQLDLAVAYI  60
KHLRERIEKL RVIKEQMMKS VEASSNIMNK NASVGLGVPV VALRDLGSSI EVMLISGLNK  120
NFMLYEVIGI LEQEGAEVVS ASFSTVGGKI FHTLHAQVKI SRVGVDTSRV CQRLQELVSY  180
YR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.12e-27bHLH family protein