PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021292439.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ZF-HD
Protein Properties Length: 178aa    MW: 19860.9 Da    PI: 7.7379
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021292439.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer88.85.4e-28958557
     ZF-HD_dimer  5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                     Y+eCl+NhAaslG++a+DGCgEf+ +   +++++ l+CaACgCHRnFHR+ +
  XP_021292439.1  9 LYRECLRNHAASLGSYATDGCGEFTLD---DTSPSNLQCAACGCHRNFHRKVS 58
                    6*************************8...6789****************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MEKEYPNDLY RECLRNHAAS LGSYATDGCG EFTLDDTSPS NLQCAACGCH RNFHRKVSYC  60
SGSRSHGDPE NTVELIDYGD GGTRGRRPVV VESTEAADRS GKKRFRTKFT AEQKEKMSGF  120
AEKLGWKLQR RDEEDEVEKF CGAIGVSRQV FKVWMHNHKN SSSTSSASTC NVSSLTTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.12e-43ZF-HD family protein