PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021292475.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 170aa    MW: 19148.7 Da    PI: 10.3986
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021292475.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.44e-11101148455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_021292475.1 101 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 148
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MVAQPIFSMA KRGFLRINHT WLASSEDESS KIVSTTSANE FNDSNGKRVK SSTKNENAGS  60
KAEVETSSAA GSKPEQYSKP AEPPKQDYIH VRARRGQATD SHSLAERARR EKISERMKIL  120
QDLVPGCNKV IGKALVLDEI INYIQSLQRQ VEVRGRYVRK VWLKERTCNT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.13e-48bHLH family protein