PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021293049.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family MYB_related
Protein Properties Length: 100aa    MW: 12225 Da    PI: 9.8495
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021293049.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.61.4e-083169545
                     -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     T++E++l+++ +++ G + W++Ia +++ gR ++++  +w 
   XP_021293049.1 31 TEQEEDLIYRMHRLVGER-WDLIAGRIP-GRKAEEIERFWI 69
                     99****************.*********.*********995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MDRLRRRKQP KITTRECEEV SSIEWEIIKV TEQEEDLIYR MHRLVGERWD LIAGRIPGRK  60
AEEIERFWIM QNSEGFAQRR RENKENISKS IWPFAFNGFK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
127DRLRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53200.14e-41MYB_related family protein