PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021293214.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family C2H2
Protein Properties Length: 251aa    MW: 27383.5 Da    PI: 8.134
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021293214.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.000127496123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_021293214.1 74 YTCTFCRREFRSAQALGGHMNVH 96
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MAAELGLLSL NQLQKLAQSQ QNQIQHQPNP SLAPASWMWN PKAQPQEDDD SWEVRAFAED  60
TGNIMGTTWP PRSYTCTFCR REFRSAQALG GHMNVHRRDR ARLHQTQPSG AINPTSSSST  120
TSSSTLLIPT QEFATNGGLC LLYQLPNPNG VFTSPPMNAC SNDSPSTLLS ISPYPSNNLM  180
AAPSLNFPAT PQGLNNSSSL CYSSKAILQR RRSAGKLPIN NIGNSSSNNC KETSIEELDL  240
ELRLGHRPTT S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.12e-41C2H2 family protein