PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021293365.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family G2-like
Protein Properties Length: 260aa    MW: 29014.7 Da    PI: 6.505
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021293365.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like31.73.4e-101203655
         G2-like 36 mkvkgLtlehvkSHLQkYRl 55
                    m+vkgLt++hvkSHLQ+YR+
  XP_021293365.1  1 MDVKGLTISHVKSHLQMYRS 20
                    9******************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MDVKGLTISH VKSHLQMYRS MRSDLGRQDR SSTHQRRQSF ENHDGCVDEV GDMGFHSTSK  60
PIEESDSHLI YSPPPSKRAR IETRSSISDQ NLQCSQGICE TVSNPYSFDD YLQTMAVHKG  120
IKEGNGAFIW EHTQSHSQGQ STTFSLPYDL YNLNSFKYSM EESDFLKVAK VEAEDHHTHV  180
ERTVRRRAGD KEEVGGGCEL SLSLSLHHPS SQKSNTSSTS EISSSEAFSS YSRSNYKDCS  240
GTSSAQRSVN LDLSIALCGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.19e-07G2-like family protein