PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021293485.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 165aa    MW: 18623.6 Da    PI: 10.5572
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021293485.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.8e-101059255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    r++ n +Er RR++++  f++L  llP+ +      K+s  + Le+A+ Y+++Lq
  XP_021293485.1 10 RMNRNLIERERRSQMKVLFSNLVALLPPhP-----SKMSIHALLERATIYVNQLQ 59
                    8999************************55.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MPRGTASLTR MNRNLIERER RSQMKVLFSN LVALLPPHPS KMSIHALLER ATIYVNQLQK  60
RTEELKQKKA QLEEGQSTAT RISPVIKITD FDSTIQVNLV AGTDMKFALC DIISILEEEG  120
AEVLSATYHI VGNKVVLSLH SQAAYSRIGI QNSRVRDRLK RLQIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10586.11e-22bHLH family protein