PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021293512.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 256aa MW: 29201.9 Da PI: 9.5141

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021293512.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.4	9.7e-52	14	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yL++kv + +l++ ++i+evd++k++Pw+Lp e+e yfFs+r+ ky++g+r+nrat sgyWkatg dk+++++ XP_021293512.1 14 LPPGFRFHPTDEELVVQYLRRKVLAWPLPA-SIIPEVDVCKADPWELPGD---LEQERYFFSTREAKYPNGNRSNRATVSGYWKATGIDKQIVTS 104 79**************************.89***********54...46799*****************************9998 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kktLvfy+g+ p+g++tdW+mheyrl XP_021293512.1 105 rSNQVVGMKKTLVFYRGKPPHGSRTDWIMHEYRL 138 57778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MEKLNFVKNG VLRLPPGFRF HPTDEELVVQ YLRRKVLAWP LPASIIPEVD VCKADPWELP 60 GDLEQERYFF STREAKYPNG NRSNRATVSG YWKATGIDKQ IVTSRSNQVV GMKKTLVFYR 120 GKPPHGSRTD WIMHEYRLVS AETAACNAPQ KKNQTQSHVV PMENWVLCRI FLKKRSGTTK 180 NDDDSMQSCN ENGARKVRTS RPVFYDFLTK DRTDLNLAPS SSSSGSSGIT EVSNNDTDDH 240 EESSSCNSFP YFRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	1e-104	NAC family protein