PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021293542.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 164aa    MW: 18558.5 Da    PI: 9.1753
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021293542.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.61.2e-09958255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    r +   +Er RR+++++ +++L  llP++   p  K+s  e + +A+ Y+k+Lq
  XP_021293542.1  9 RINRCLIERERRRNMKTLYSNLFALLPPQ---P-SKMSVPELVDQATAYVKHLQ 58
                    5566789*********************6...3.8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MENGAGSSRI NRCLIERERR RNMKTLYSNL FALLPPQPSK MSVPELVDQA TAYVKHLQKK  60
LEKYKQMKVQ LEDKRPTAHT MRPPVLNIRD LGSNLEVHLI TGLNMEFALS DFISILQEEG  120
AEIVSATCHH TGDRAIYTIL SQAIYPRIGI ATSSVHERLT SLIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10586.19e-31bHLH family protein