PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021293568.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 173aa    MW: 19278.1 Da    PI: 8.6382
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021293568.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.91e-091661554
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                       +E+ RR r+++ +++L +llP++     +K+s  ++Le+A+ +I++L
  XP_021293568.1 16 RTLVEKERRMRLRNLYSQLSSLLPPQ----PRKMSTHDVLEQATLCINQL 61
                    6789*********************6....39****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MDTGAASGSS SSKINRTLVE KERRMRLRNL YSQLSSLLPP QPRKMSTHDV LEQATLCINQ  60
LRKRVEELKQ MKLQLEECKG ATETTSGPSI YPVINISDLD STLEVNLITG WDGKFKLSDI  120
IKVLMEEGAE VKTAVANHNA GDRTIYSICC RAINSRIGIA TSRVQERLQD LIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10586.15e-23bHLH family protein