PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021293728.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family Dof
Protein Properties Length: 159aa    MW: 17946.9 Da    PI: 9.5952
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021293728.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1122.7e-354199260
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
                    ++k+++ prC+s++tkfCy+nny+++ Pr+fCk+C+ryWt+G alrnvPvG+grrk k 
  XP_021293728.1 41 PDKIIPXPRCKSMETKFCYFNNYNVNXPRHFCKGCQRYWTAGWALRNVPVGAGRRKAKP 99
                    688999**************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MVMASQEGQG IKLFGTTITL HGRQVKEEQN KADHPALDKR PDKIIPXPRC KSMETKFCYF  60
NNYNVNXPRH FCKGCQRYWT AGWALRNVPV GAGRRKAKPX GRDLGGFAEG CLYDGSSGVH  120
QFELEGMMLD EWQVAAANGG FRQVFPMKRR RISCSGEMC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1148152KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29160.15e-62Dof family protein