PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021294102.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 236aa    MW: 26201.5 Da    PI: 4.8754
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021294102.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.42e-1164116155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     ++ +h  +Er+RR+++ + ++ Lr+llP       ++K   ++    Av YIk+Lq
  XP_021294102.1  64 KKLMHRDIERQRRQEMATLYASLRTLLPLeY---IKGKRAISDHMNGAVCYIKDLQ 116
                     5789*************************77...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MDEMFFQVSS NSDPQNTTPQ DKILDFALPV DGTSNLSSNM GSRGQQRKLW ASDKSENSND  60
DNKKKLMHRD IERQRRQEMA TLYASLRTLL PLEYIKGKRA ISDHMNGAVC YIKDLQKRID  120
ELSAKRDELK KLSNSSCFDQ GMSSNDSFPS SVVVRQSLNG VEVVISTGLG AEALTLSRVL  180
ELLLEEGLDV VSCISTRIDG GLIHTIQSEV SDLTYVNVPG LEQKLNEEIS SLGQIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.17e-43bHLH family protein