PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021294217.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NF-YB
Protein Properties Length: 149aa    MW: 16191.1 Da    PI: 7.1437
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021294217.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB154.42e-481811797
           NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                    mkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfedyveplkvyl+k+re+ege+
  XP_021294217.1  1 MKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLHKFREMEGER 81
                    9******************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MKKALPANAK ISKDAKETVQ ECVSEFISFI TGEASDKCQR EKRKTINGDD LLWAMTTLGF  60
EDYVEPLKVY LHKFREMEGE RTALGRQPTD QRDGSSADDS TNAAAGGAFA GPAMYGGMQS  120
TMMLMGHHHH QSHMYGSGTG SGASSGRPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47640.17e-57NF-YB family protein