PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021294218.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NF-YB
Protein Properties Length: 186aa    MW: 20229.4 Da    PI: 6.3953
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021294218.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB187.21.2e-5823118297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfedyveplkvyl+k+re+ege
  XP_021294218.1  23 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLHKFREMEGE 117
                     89********************************************************************************************9 PP

           NF-YB  97 k 97 
                     +
  XP_021294218.1 118 R 118
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MADSDNDSGG HNNSNANNEL SPREQDRFLP IANVSRIMKK ALPANAKISK DAKETVQECV  60
SEFISFITGE ASDKCQREKR KTINGDDLLW AMTTLGFEDY VEPLKVYLHK FREMEGERTA  120
LGRQPTDQRD GSSADDSTNA AAGGAFAGPA MYGGMQSTMM LMGHHHHQSH MYGSGTGSGA  180
SSGRPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47640.15e-71NF-YB family protein