PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021294335.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 351aa MW: 38742.4 Da PI: 9.7004

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021294335.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.8	4.9e-54	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLk+k+++ +l++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+++++ XP_021294335.1 15 LPPGFRFHPTDEELVVHYLKRKAASAPLPV-TIIAEVDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIITS 108 79**************************.89***********8888999********************************9998 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk Lvfy g+ pkg kt+W+mheyrl XP_021294335.1 109 nGNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 142 67788*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MESTDSSSAS PHPQLPPGFR FHPTDEELVV HYLKRKAASA PLPVTIIAEV DLYKFDPWEL 60 PSKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPIITSNG NQKVGVKKAL 120 VFYGGKPPKG IKTNWIMHEY RLVDNNSTSK PQIADVANRK GSLRLDDWVL CRIYKKNNTQ 180 RPMERDKDYS TVGMLATLPT STHHNPKPPT SKATGYGSLL ENEANFFEGI LTGEGMQHSS 240 ISQIPAASSS SKQDLSMSLA STTTNAFPVK RTVPPQYWNE PNSSFGSQAG KRFQGDLNSS 300 STAGIDDTNS FVSLLNQLPQ NAPFYPGTLV GSFGDGVSRQ QFILPSVNWN S

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MESTDSSSAS PHPQLPPGFR FHPTDEELVV HYLKRKAASA PLPVTIIAEV DLYKFDPWEL  60
PSKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPIITSNG NQKVGVKKAL  120
VFYGGKPPKG IKTNWIMHEY RLVDNNSTSK PQIADVANRK GSLRLDDWVL CRIYKKNNTQ  180
RPMERDKDYS TVGMLATLPT STHHNPKPPT SKATGYGSLL ENEANFFEGI LTGEGMQHSS  240
ISQIPAASSS SKQDLSMSLA STTTNAFPVK RTVPPQYWNE PNSSFGSQAG KRFQGDLNSS  300
STAGIDDTNS FVSLLNQLPQ NAPFYPGTLV GSFGDGVSRQ QFILPSVNWN S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-108	NAC family protein