PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021294377.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 239aa    MW: 26132.7 Da    PI: 4.6538
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021294377.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.55.9e-1759109155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr ++ +g+Wv+eIr+p++   + r++lg+f  +e+Aa+a + a+++++g
  XP_021294377.1  59 PVYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFPNPEMAARAQDVAALSIKG 109
                     68*****998.**********843...6**********************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MTETNHSSSE VESCSSNNSN SSASSSSQTR QNLSRKTNPA QSPEDSRAKK PRDSSSKHPV  60
YRGVRMRSWG KWVSEIREPR KKSRIWLGTF PNPEMAARAQ DVAALSIKGD SAILNFPELA  120
ELLPRPVSLL PRDIQAAAAK AAAMVNFDTP SSSSSSSSES SSLSESNASE EPAELSEIVQ  180
LPNIEGNFDS LFDSRNEFIL LDSVDGWAYP PQDFYGGFCD QTWATENLVP GSFGTSMWE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25810.12e-52ERF family protein