PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021294404.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 250aa    MW: 27559.2 Da    PI: 5.2235
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021294404.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.91e-0994140554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     +  rE+ RRdr+N++f eL ++l +    +  K++Ka iL  Av+ + +L
  XP_021294404.1  94 KACREKMRRDRLNDRFLELGSILDPG---RPLKVDKAVILVDAVRMVTQL 140
                     678**********************8...88**************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MMSRQPNGEE LVSSENPNTW IFDDYGLLED IPVPGGDLPS LDPAAPIWSS QSLACSTPPL  60
SVEFNESFGN SDSLNETGSR KRARSGSCSA SGSKACREKM RRDRLNDRFL ELGSILDPGR  120
PLKVDKAVIL VDAVRMVTQL RDEAQKLRES NESLQEKINE LKAEKNELRD EKQRLKTEKE  180
NLERQVKALG TQPGFLPHPP AIPTPFSTPG QVVGGKLVPF VGYPGVSMWQ FLPPASVDTS  240
QDHILRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.15e-81bHLH family protein