PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021294703.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 218aa    MW: 24596.6 Da    PI: 10.3717
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021294703.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64.3e-20114165256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr+++ +g+++AeIrd + ng  +r++lg+f taeeAa a+++a+ +++g+
  XP_021294703.1 114 HYRGVRRRP-WGKYAAEIRDSTRNG--ARVWLGTFETAEEAALAYDRAAFRMRGA 165
                     8********.**********44465..**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MHPRFFFLKW KSRATLYKLQ ASSNTILYPG KLSAMTSHPE EKTWKESMVQ VSHSENQLPF  60
NENDSQDMFI YQVLNEANAH AVAINNFHQF HVPPRNQSSA TNMLEPSRTI AKKHYRGVRR  120
RPWGKYAAEI RDSTRNGARV WLGTFETAEE AALAYDRAAF RMRGAKALLN FPAEVVAASS  180
VQRLRPNLSS TRSEKTNPDS GSSCRALSIS ESESSTTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-32ERF family protein