PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021294716.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family HSF
Protein Properties Length: 194aa    MW: 22468.4 Da    PI: 8.3379
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021294716.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind98.95e-31191202103
                     HHHHHHHHHC........TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT.TEEE---SSBTTTTXTTSEEEEESXXX CS
    HSF_DNA-bind   2 Flkklyeile........deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY.gFkkvkdeekkskskekiweFkhksFk 87 
                     Fl k+y +le         ++ k+++sw+++g+ fvv+ + ef++  Lp+yFkh+nf+SF+RQLn+Y gFkk+++++         weFkh++F+
  XP_021294716.1  19 FLWKTYALLEegeegaetADHSKKIVSWNAEGTGFVVWSPAEFSELTLPRYFKHNNFSSFIRQLNTYqGFKKTSSKR---------WEFKHEKFQ 104
                     99********6666665555999********************************************88**999988.........********* PP

                     XXXXXXXXXXXXXXXX CS
    HSF_DNA-bind  88 kgkkellekikrkkse 103
                     +g k+ll +i rkk+e
  XP_021294716.1 105 RGCKHLLVEITRKKTE 120
                     *************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MSKITTSSLS PRTKGAAPFL WKTYALLEEG EEGAETADHS KKIVSWNAEG TGFVVWSPAE  60
FSELTLPRYF KHNNFSSFIR QLNTYQGFKK TSSKRWEFKH EKFQRGCKHL LVEITRKKTE  120
PSVFPAFLKA SDEDNANHVE ENSCQTLLEE NEILRREKEE LQTQIAQFKA LEIKLLDCLA  180
QHMGNTNHKE RRLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.14e-32HSF family protein