PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021294717.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

HSF

Protein Properties

Length: 193aa MW: 22340.3 Da PI: 8.3379

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021294717.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	106.1	2.9e-33	19	119	2	103
HHHHHHHHHC........TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXX CS HSF_DNA-bind 2 Flkklyeile........deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkk 88 Fl k+y +le ++ k+++sw+++g+ fvv+ + ef++ Lp+yFkh+nf+SF+RQLn+YgFkk+++++ weFkh++F++ XP_021294717.1 19 FLWKTYALLEegeegaetADHSKKIVSWNAEGTGFVVWSPAEFSELTLPRYFKHNNFSSFIRQLNTYGFKKTSSKR---------WEFKHEKFQR 104 99******6666665555999*********************************************9998.........****** PP XXXXXXXXXXXXXXX CS HSF_DNA-bind 89 gkkellekikrkkse 103 g k+ll +i rkk+e XP_021294717.1 105 GCKHLLVEITRKKTE 119 **********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MSKITTSSLS PRTKGAAPFL WKTYALLEEG EEGAETADHS KKIVSWNAEG TGFVVWSPAE 60 FSELTLPRYF KHNNFSSFIR QLNTYGFKKT SSKRWEFKHE KFQRGCKHLL VEITRKKTEP 120 SVFPAFLKAS DEDNANHVEE NSCQTLLEEN EILRREKEEL QTQIAQFKAL EIKLLDCLAQ 180 HMGNTNHKER RLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36990.1	6e-34	HSF family protein