PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021294810.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 179aa    MW: 20352 Da    PI: 9.493
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021294810.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.92.3e-05153179228
                     HHHHHHHHHHHHHHHHHHHHHHHCTSC CS
             HLH   2 rrahnerErrRRdriNsafeeLrellP 28 
                     + +h+ +Er RR++i  ++  L++l+P
  XP_021294810.1 153 KDKHSLAERVRREKISVRMKLLQSLVP 179
                     568***********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MSSFLREESS ATKTCFSSNF PDACFQEFIP GQYAQNHEAI TLNEVNLDVP FTFPVNPFAI  60
ANQDLESTAI RTPLELEQRG DDHQLTGEGS ASENKRKKVE TKVEREKKGK NIRGLEQAKE  120
SRLKPDIKNK KKVPEKVETD NYVHVRAGRG EAKDKHSLAE RVRREKISVR MKLLQSLVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.11e-15bHLH family protein