PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021294852.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 153aa    MW: 17390.6 Da    PI: 10.0472
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021294852.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.21.1e-11960255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                    r+  + +Er+RR++++  +++L +l+P+    +s+   s  + L +A +YIk Lq
  XP_021294852.1  9 RTDRKLIERNRRNQMKALYSKLNSLIPHH---NSREsTSLPDQLGEAANYIKRLQ 60
                    778899**********************7...55555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MEHNPNSSRT DRKLIERNRR NQMKALYSKL NSLIPHHNSR ESTSLPDQLG EAANYIKRLQ  60
TNLERMKERK DSLLGVERST NTSRSSGPRS PQIQIQEMGS SLVIGLIAGS NSQFIFNETI  120
RFLHEEGAEI VNASFSVVDD NVFHTIHLTK FLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-43bHLH family protein