PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021294864.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family Dof
Protein Properties Length: 256aa    MW: 27496.2 Da    PI: 9.0099
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021294864.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof127.83.1e-401777262
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    ++++lkcprC+stntkfCyynny+lsqPr+fCk+CrryWtkGGalrn+PvGgg+rkn k+s
  XP_021294864.1 17 EQEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKNTKRS 77
                    57899****************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MQDPTGFQQM KAPAFPEQEQ LKCPRCESTN TKFCYYNNYN LSQPRHFCKN CRRYWTKGGA  60
LRNIPVGGGT RKNTKRSSSS SSSSSSSSTN NPKRQPNPAT DPNRNPKLPD PSLPRTSSST  120
IPQQVVLNSG VLNSGSDGDP TRMYVLSVNH QDRKMMDIGG SFSSLLSSSG QFGNLLEGLN  180
PNGPGLKTVQ MGEFGGNLDS GHGMNQVPSR DPGLGESNNN GESYLGVQGS GDTSCWTGGS  240
NGWPDLAIYT PGSSFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.15e-40Dof family protein