PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021295154.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

G2-like

Protein Properties

Length: 128aa MW: 14448.6 Da PI: 10.3999

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021295154.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.5	3.6e-34	64	117	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv+ave+LGG+++AtPk +l++m+vkgLt++hvkSHLQ+YR+ XP_021295154.1 64 PRLRWTPDLHHCFVHAVEHLGGEDRATPKMVLQIMDVKGLTISHVKSHLQMYRS 117 8****************************************************7 PP
2	Myb_DNA-binding	50.2	5.7e-16	65	116	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+av+ lGg+ t+k + + m kg+t ++ks++q+y+ XP_021295154.1 65 RLRWTPDLHHCFVHAVEHLGGEdraTPKMVLQIMDvKGLTISHVKSHLQMYR 116 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 128 aa Download sequence
MKRVDGDSAL KGSPSSSLDS GSVYYSQSST MRATRRRMDD NLVPEISLKS PTAVVRPYAR 60 SKMPRLRWTP DLHHCFVHAV EHLGGEDRAT PKMVLQIMDV KGLTISHVKS HLQMYRSMKH 120 EQMIPGNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	1e-33	G2-like family protein