PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021295177.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family MYB_related
Protein Properties Length: 81aa    MW: 9547.52 Da    PI: 9.214
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021295177.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.58.7e-102869245
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                       ++++E+ l+ + +++ G + W++Ia +++ gRt+ ++  +w 
   XP_021295177.1 28 VEFSEDEEMLITRMFNLVGDR-WSLIAGRIP-GRTADEIEKYWT 69
                     679****************99.*********.***********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    
MGDLDRSSRS RGRRQDTKEV RTDQDAKVEF SEDEEMLITR MFNLVGDRWS LIAGRIPGRT  60
ADEIEKYWTS RRSSQSTHNQ R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.11e-18MYB_related family protein