PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021295250.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

WRKY

Protein Properties

Length: 185aa MW: 20985.7 Da PI: 9.9599

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021295250.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.7	5.1e-33	106	164	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ +v++tYeg H h+ XP_021295250.1 106 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGIVVTTYEGMHSHP 164 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence
MENFQGFSPN SSTLSASSLS LNMTNSLGYA EFQGNKANGL LGLMAEMEGP ASLNVHNISQ 60 NKTFPEINSL AGTETETDVK FGKKKADKKI RKPRYAFQTR SQVDILDDGY RWRKYGQKAV 120 KNNKFPRSYY RCTHQGCNVK KQVQRLTKDE GIVVTTYEGM HSHPIQKSND NFEHILSQMQ 180 IFTSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	1e-58	WRKY family protein