PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021295398.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 226aa    MW: 24406.6 Da    PI: 10.22
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021295398.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.52.5e-212776255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa+++++g
  XP_021295398.1 27 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRG 76
                    6********.**********8...557*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MAPKDKNASQ MLKKGNVNGI IKSKEVHYRG VRKRPWGRYA AEIRDPGKKS RVWLGTFDTA  60
EEAARAYDAA AREFRGPKAK TNFPVPDKTN SYIGNKRQNQ QSPSPSSTVE ESSSPTVERE  120
LKRVGSSATG IVGRFPFACH QQLALGGADR MGGVAHARPV LFFDALGRAE VVGQVYPVRF  180
EPVGVELSMG FGGVVQSESD SSSVVDCKPR LPGPGLDLNL PPPVDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.18e-36ERF family protein