PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021295502.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NF-YB
Protein Properties Length: 180aa    MW: 19414.7 Da    PI: 5.0349
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021295502.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB184.29.9e-5846143198
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     vreqdr+lPian+srimkk+lPan+ki+kdak+tvqecvsefisf+tseasdkcq+ekrktingddllwa+atlGfedy+eplkvyl +yreleg
  XP_021295502.1  46 VREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLGRYRELEG 140
                     69********************************************************************************************* PP

           NF-YB  96 ekk 98 
                     ++k
  XP_021295502.1 141 DTK 143
                     975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MYGWMCAFGD LGFFGDMADG MQAGPTSPAG GSHESGGEQS SPHSNVREQD RYLPIANISR  60
IMKKALPANG KIAKDAKDTV QECVSEFISF ITSEASDKCQ KEKRKTINGD DLLWAMATLG  120
FEDYIEPLKV YLGRYRELEG DTKGSARGGD GSLKRDAAGA LAAQNAQFAI QGSLNYITSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53340.12e-70NF-YB family protein