PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021295503.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NF-YB
Protein Properties Length: 179aa    MW: 19224.4 Da    PI: 5.731
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021295503.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB184.39.8e-5830127198
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     vreqdr+lPian+srimkk+lPan+ki+kdak+tvqecvsefisf+tseasdkcq+ekrktingddllwa+atlGfedy+eplkvyl +yreleg
  XP_021295503.1  30 VREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLGRYRELEG 124
                     69********************************************************************************************* PP

           NF-YB  96 ekk 98 
                     ++k
  XP_021295503.1 125 DTK 127
                     975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MADGMQAGPT SPAGGSHESG GEQSSPHSNV REQDRYLPIA NISRIMKKAL PANGKIAKDA  60
KDTVQECVSE FISFITSEAS DKCQKEKRKT INGDDLLWAM ATLGFEDYIE PLKVYLGRYR  120
ELEGDTKGSA RGGDGSLKRD AAGALAAQNA QFAIQGSLNY ITSQAQGQHM IVPSMQGNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.13e-74NF-YB family protein