PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021295761.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family C2H2
Protein Properties Length: 184aa    MW: 20207.2 Da    PI: 8.9198
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021295761.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.80.00164567123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C++ F++   L  H  +H
  XP_021295761.1 45 FECKTCNRQFPSFQALGGHRASH 67
                    89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MKRSFSDRSE VENSFALANC LMLLSQGGGN KYEHVVDNSI PSRVFECKTC NRQFPSFQAL  60
GGHRASHKKP RLTEGDGSME NQPPAKPKTH ECSICGLEFA IGQALGGHMR RHRAGLSENS  120
HQHGPLSLSN KPVVMPPIVK KSNSRRVLCL DLNLTPLEND LELFKLGKAA PPAIDCLFYA  180
LPST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.18e-44C2H2 family protein