PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021295845.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 163aa    MW: 18481.4 Da    PI: 6.0034
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021295845.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.21.3e-07349555
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                     n +Er RR ++++ +++L  llP++     + +s  +++e+A+ Y+k+Lq
  XP_021295845.1  3 RNSIERERRLNMRNLLSRLFPLLPPQ----PTEMSIPDMVELATIYVKQLQ 49
                    599**********************6....399*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MDRNSIERER RLNMRNLLSR LFPLLPPQPT EMSIPDMVEL ATIYVKQLQR QLEEIKKRKM  60
QLEGESEAVC RVTRKTISPV LDIIDSNSTT RVNLITGSNM KFTLSEIISV IEEEGAAVIG  120
VTYNNAGETM NILSVHCQAI CSRIGNESSR LGERLKTLLE ECM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10585.19e-14bHLH family protein