PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021296123.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WOX
Protein Properties Length: 198aa    MW: 22432 Da    PI: 8.9254
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021296123.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.28.8e-213596157
                    TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    ++ R+++t+eq+++L +lF++  r+ps++++++++++l    +++ ++V++WFqN++a+e++
  XP_021296123.1 35 KCGRWNPTTEQVKVLTDLFRSgLRTPSTDQIQKISTQLsfygKIESKNVFYWFQNHKARERQ 96
                    568*****************99**************************************97 PP
2Wus_type_Homeobox114.65e-373598265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ++ RW+Pt+eQ+k+L++l++sGlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+
     XP_021296123.1 35 KCGRWNPTTEQVKVLTDLFRSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKR 98
                       678***********************************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MDDGLSGFSI KGGSVRGNGN NGSGGGGGGG GGGTKCGRWN PTTEQVKVLT DLFRSGLRTP  60
STDQIQKIST QLSFYGKIES KNVFYWFQNH KARERQKRRK VSMDENDFIC RDNKISSSKR  120
FFEVNHHQEQ VKGCQPERVI ETLQLFPLNS FEESDYQQEK HLRFHASDQC RETAAFPYKI  180
STPETDHHPP LDLRLSFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11260.13e-63WOX family protein