PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021296139.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 248aa    MW: 28739.7 Da    PI: 6.7582
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021296139.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.27.5e-125297352
             AP2  3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkk 52
                    ++GVr+++   ++++eIrd +     + kr +lg++ t+eeAa+a+   + +
  XP_021296139.1 52 FQGVRRRP-CSKFASEIRDpF-----NkKRLWLGTHSTEEEAAAAYQTKKCE 97
                    79******.7*********55.....34*****************9766655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MKPGLNLPKK LRVIYNDPDA TDLSSDEEKI DCWKKRKNQI GSRRPRRSSS MFQGVRRRPC  60
SKFASEIRDP FNKKRLWLGT HSTEEEAAAA YQTKKCEFED MMAAKNKSSL TSELFSQLFP  120
SSVLDDVSSN PIQEEANNAE KTMTKHTMKK VVKEYRNVKE QPCLDQWDEW KDEPSIMELW  180
EVPPSASESW EELFRPYGHE NYLPCGSAAV SCLLLPKNSK DKLFDQPDIK TKMKDMAWAD  240
ELLNLEFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49120.13e-18ERF family protein