PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021296195.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 162aa    MW: 18373.4 Da    PI: 8.4954
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021296195.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.61.5e-10549755
                    HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                     +Er RR+++N+ +++L +llP++     +K+s    Le+A+ +Ik+Lq
  XP_021296195.1  5 LIERERRSNMNNLYSKLFSLLPPQ----PTKMSILGNLELATVHIKELQ 49
                    59*********************6....39******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MQRCLIERER RSNMNNLYSK LFSLLPPQPT KMSILGNLEL ATVHIKELQR QVEELKRRKM  60
QLEEESQALN RAKSETITPV LNIIESHSVM QVNLVIGSDM KFILGEVISI IEEEGAEVAG  120
ATYNHAGKVN RNILSIHCET ACSNIGFKSS KVLERLKTLI KE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10586.18e-07bHLH family protein