PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021296794.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 172aa    MW: 19971.8 Da    PI: 8.6241
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021296794.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM76.37.4e-24111432128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.lel.eevikevdiykv.ePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                      +G+rF+P+d  l+  yL  k+++k+ l++ +evik++d+y   ePw++ +     ++  + +++yfF++++kk++++++ nr + +g+Wk tg 
  XP_021296794.1  11 LVGLRFQPSDAMLL-GYLFSKITNKSrLHVdQEVIKDFDLYGEkEPWEIWElyrgdNL-RSGEDLYFFTRSKKKTQNSSKMNRLIGTGTWKITGP 103
                     68*********999.7888888888774441467******96449****742333222.245689****************************** PP

             NAM  89 dkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++++ +  + +  g +k + + ++ a+  + ++W+m ey+l
  XP_021296794.1 104 PEAITYSqlSAQPLGFRKRFRYKSEVAQ--QVSQWIMFEYSL 143
                     ****998777888*********955554..58********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MGDNIPVAAL LVGLRFQPSD AMLLGYLFSK ITNKSRLHVD QEVIKDFDLY GEKEPWEIWE  60
LYRGDNLRSG EDLYFFTRSK KKTQNSSKMN RLIGTGTWKI TGPPEAITYS QLSAQPLGFR  120
KRFRYKSEVA QQVSQWIMFE YSLDTDHDLV SKNDCNYVLC GLQKRDLKEE KG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.12e-18NAC family protein