PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021297070.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 229aa    MW: 25454.2 Da    PI: 5.0602
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021297070.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-1860110155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +g+Wv+e+r+p   +k+ r++lg+f tae+Aa+a++ a+  l+g
  XP_021297070.1  60 PVYRGVRRRN-SGKWVCEVREP---NKKSRIWLGTFPTAEMAARAHDVAAITLRG 110
                     68*****888.8******9998...347************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MDFLAQDYEM LDSGSVSSPI SDSGSVNCRP ANFSDEDVML ASSYPKKRAG RKKFRETRHP  60
VYRGVRRRNS GKWVCEVREP NKKSRIWLGT FPTAEMAARA HDVAAITLRG RSACLNFADS  120
AWRLPVPAST DPKDIQKAAA EAAEAFRSAE HSDGNSGYDA KREENTEAEK VTESENGFYL  180
DEEEIFGTPR FLANMAAGML LSPPRCGYNG NEEECDVADD YVPLWSHSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.16e-77ERF family protein