PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021297456.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 233aa    MW: 26802.3 Da    PI: 6.2563
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021297456.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.13.7e-1463115155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+ +hn+rEr RR++iNs +  Lr+llP +  ++ k+ls  ++  ++ +YI +Lq
  XP_021297456.1  63 RKLNHNARERDRRKKINSLYTSLRSLLPLS--EQTKRLSIPATISRVLKYIPELQ 115
                     6889*************************7..36666***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MCALTPFPVC EWPLDAPINH IEQISYAEGF EDFHHFTSTL PPIELDGSPS FSGDSGNNPI  60
VLRKLNHNAR ERDRRKKINS LYTSLRSLLP LSEQTKRLSI PATISRVLKY IPELQAHVER  120
LAQRKEEILS RQDEFSCDQD NKREGSSPFA MSVSRVSERE VVVQISTFRA FETPLSRVLF  180
NLEEDGLFLT EASCFESFGG RVFYNLHFQV ERTYNLEGVV LNEKLSSLYE KRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.19e-47bHLH family protein