PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021297457.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 232aa    MW: 26674.1 Da    PI: 5.9752
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021297457.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.65.2e-1463114155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+ +hn+rEr RR++iNs +  Lr+llP +    +++ls  ++  ++ +YI +Lq
  XP_021297457.1  63 RKLNHNARERDRRKKINSLYTSLRSLLPLS---EQTRLSIPATISRVLKYIPELQ 114
                     6889*************************9...9******************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MCALTPFPVC EWPLDAPINH IEQISYAEGF EDFHHFTSTL PPIELDGSPS FSGDSGNNPI  60
VLRKLNHNAR ERDRRKKINS LYTSLRSLLP LSEQTRLSIP ATISRVLKYI PELQAHVERL  120
AQRKEEILSR QDEFSCDQDN KREGSSPFAM SVSRVSEREV VVQISTFRAF ETPLSRVLFN  180
LEEDGLFLTE ASCFESFGGR VFYNLHFQVE RTYNLEGVVL NEKLSSLYEK RK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.13e-44bHLH family protein