PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021297552.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family Nin-like
Protein Properties Length: 255aa    MW: 29429.6 Da    PI: 6.7898
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021297552.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK81.39.7e-26146195352
          RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     + ++l++++kyF+ pi  AAke++v+lTvLK++CR+++I+RWPhRkiksl
  XP_021297552.1 146 APLELDEIQKYFDFPISRAAKEMNVGLTVLKKRCRELNIMRWPHRKIKSL 195
                     6799********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MDSTNLNFPK LVNAPDFDWF NFEENPFGTA LELPPFEMDG FYDFNDYNFN SLALPSRTDY  60
LEFKDFEDIS GDFALFENTS TLPSLHEDIL VDAKPLKTMV GPLGQYCGNI TNMGGSSETV  120
TVIQSDYGAS SGYGQQRRLS GRKRTAPLEL DEIQKYFDFP ISRAAKEMNV GLTVLKKRCR  180
ELNIMRWPHR KIKSLTALIN NVKELGLTKE IMMLEEHRRL LEKLPDMELT ERTKKLRQAC  240
FKANYKKRRS LAAYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53040.11e-46Nin-like family protein