PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021297918.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 239aa MW: 26794.2 Da PI: 9.8606

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021297918.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	121.5	7.5e-38	15	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +p G+rFhPtdeelvv+yLk+kv + +l++ +vi+e+d+++++Pw+Lp ++++ yfFs++ +++ +k+ +ra+ sgyWk gk+k++l++ XP_021297918.1 15 MPIGYRFHPTDEELVVHYLKRKVLSLPLPA-SVIPEFDVFQTDPWSLPG---DSKENRYFFSNSYGNES-NKNGKRAAGSGYWKPIGKEKPILAS 104 699*************************.99***********3...35567899988765.57889999************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg++k L++ + ++++ +kt+W++h+yrl XP_021297918.1 105 gSNQVVGMRKALIYCERKSSNDTKTRWLLHQYRL 138 66778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MESSRNFVVN GGIKMPIGYR FHPTDEELVV HYLKRKVLSL PLPASVIPEF DVFQTDPWSL 60 PGDSKENRYF FSNSYGNESN KNGKRAAGSG YWKPIGKEKP ILASGSNQVV GMRKALIYCE 120 RKSSNDTKTR WLLHQYRLVG SAAALGSSQM SKWKLFGDWL VFRVFQRKRN AKKHRASSNK 180 SQTTSAVTMP SCIDFTVEDC SVYGPPQPSS PSSSEITEVS LNGLVEEESS DFISSYSNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	2e-51	NAC family protein