PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021298025.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family C2H2
Protein Properties Length: 150aa    MW: 16917.9 Da    PI: 9.1315
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021298025.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.000113658123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C +C++ F ++  L  H++ H
  XP_021298025.1 36 FQCLYCPRKFYTSQALGGHQNAH 58
                    89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MADPSMYNFF NQPSSAPKPT KKQPQRASPS APTRLFQCLY CPRKFYTSQA LGGHQNAHKR  60
ERAAARRKFP VDQPQQFNLH PQNPYTRFPA EPPMDHPGAP YLDQWLEPFP FPPSLWWVGP  120
SGFSGASSPE TFSPSTDVDD SANVDLTLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14010.12e-09C2H2 family protein