PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021298098.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family BES1
Protein Properties Length: 207aa    MW: 22535.7 Da    PI: 8.4051
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021298098.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822111.51.3e-3426124295
          DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr....kgskpl....eeaeaagssasa 88 
                     g gr +++ E+E++k RER+RRai++ i+ GLR++G+y+l  raD+n+Vl  L++eAGwvve+DGttyr        ++        a++ s++ 
  XP_021298098.1  26 GRGRGRSEIEKERTKMRERQRRAITTNIFHGLRRHGGYHLSPRADINQVLCHLAKEAGWVVEPDGTTYRsisvS---KTahccPVCGAMKPSTTP 117
                     57899999*************************************************************54331...222222334455555556 PP

          DUF822  89 spesslq 95 
                     +p+ss+ 
  XP_021298098.1 118 TPSSSVV 124
                     6666655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MHHATKAQTL VALICWTAFS SVKEMGRGRG RSEIEKERTK MRERQRRAIT TNIFHGLRRH  60
GGYHLSPRAD INQVLCHLAK EAGWVVEPDG TTYRSISVSK TAHCCPVCGA MKPSTTPTPS  120
SSVVIGGGEC STTASPRNNP EAAVEDPIRV IDSFCDNLIP IAPYMYGGED GFSALALQQL  180
YPQEAAPRSQ CMPLGSPLVR GKEEGNI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.18e-23BES1 family protein