PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021298306.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 190aa    MW: 21014.8 Da    PI: 9.3028
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021298306.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.32.1e-19555155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    ++++GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAa+a+++a+  + g
  XP_021298306.1  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDEAAILMSG 55
                    59*******9.**********8.....334*********************987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MVQSKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFETAE EAARAYDEAA ILMSGRNAKT  60
NFPVAKNQPG NGNPAASSSS TGATGALSSN LSEKLRKCCK TPSPSLTCLR LDTENSHIGV  120
WQKRAGARPD SSWVMTVELE KKNVGEVAEI NKKRPVPEEP GEMMGQEVGD GLDEEQKAAL  180
QMIEELLNRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.13e-65ERF family protein