PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021298885.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 248aa    MW: 27968.6 Da    PI: 8.2214
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021298885.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.97.5e-08137184455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++iN+++  L++l+P ++    k +  a +L   + Y++sLq
  XP_021298885.1 137 SHSLAERVRREKINEKLRCLQDLVPGCY----KAMGMALMLDVIISYVQSLQ 184
                     8************************982....33555556666666666655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MAEFTQELQS LKQFSFSSET NTNLQLINSR RALKNHDSSD NHAQLMALSN SILFHTQPPQ  60
ISFNFTGNLV RESKNDNTMP IAESPLDLST SPGSVTGSSG NNKSYVARKR KRNGEEDMQK  120
PKEVVHVRAK RGQATDSHSL AERVRREKIN EKLRCLQDLV PGCYKAMGMA LMLDVIISYV  180
QSLQNQIDFL SMKLSAASMY YDLNFSEIEV METLQGTKAN AYDQVQEMER MMREGHGGSS  240
YFNSARPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.15e-59bHLH family protein