PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021299324.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family B3
Protein Properties Length: 132aa    MW: 14743.2 Da    PI: 10.3125
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021299324.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.29.3e-1617981496
                    T-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3 14 grlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
                    +rl +p k ++      gg+    ++l ++d +g sW++ ++ rk++ +  vl+kGW++Fv a+gL +gD v+F+ +g++++   +kv
  XP_021299324.1 17 KRLAIPTKSLAFLphfcGGN---AIELPVRDDNGCSWTFVCSLRKTGYAkPVLQKGWRHFVLAKGLTVGDKVTFYQQGTDDG---IKV 98
                    57889998886668787766...578***************998887777*************************7776665...444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MKKRVLSKSL THTDICKRLA IPTKSLAFLP HFCGGNAIEL PVRDDNGCSW TFVCSLRKTG  60
YAKPVLQKGW RHFVLAKGLT VGDKVTFYQQ GTDDGIKVFG TVFPRSCYSI EVERAIKPSL  120
SRACVDHNLA RK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01500.13e-09B3 family protein